Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015796343.1_cds_XP_016448797.1_4272
CDS Infomation

[gene=LOC107773883] [db_xref=GeneID:107773883] [protein=reticuline oxidase-like protein] [protein_id=XP_016448797.1] [location=9158..10756] [gbkey=CDS]
Sequence

ATGGAGACTTCTCTCTATCTAACCTTTTTTGCATTTCTTTCTCTTCTTTTTGCCATCTAT
TATATACCGTTGGCAGCCTCTGATCCATCATACCAGAGTTTTCTTCAGTGCTTATCCAAA
CATTCAGATCCATCCGACCACATACTGTCTAGAGTGTACACTCCAAACAATTCATCATAT
AAGTCTGTGCTACAACACTATATCAGAAACAAGAGGTTCAATAGATCAACCACTCTAAAG
CCGGACATTATTTTCACTCCTTTGCAAGAATCCCATATCCAGGTTGCTGTCATTTGCAGC
AAGAAAACTGACAAGCACCTAAAGATCCGAAGTGGAGGGCATGACTACGAAGGCATTTCT
TACGTTTCCAACATCAGTTTTGTTCTCCTTGACATGTCTAACCTGCGTTCTGTTGATGTA
GATATCCATAATGAAACTGCTTGGGTCCAAGCTGGTGCAACTCTGGGCGAACTTTATTAC
AGAATCTGGGAAAAAAGCAAAATCCACGCCTTCCCAGCTGGAATTTGCCCAACTGTTGGT
GTTGGCGGACACATAACTGGAGGAGGATATGGTAACCTGTTGAGAAAATATGGACTGTCA
GTGGATAATTTGATTGATGCGCACATAGTAGATGTTCACGGTCAAATTCTGAACAGAGAA
TCAATGGGAGAAGACCTGTTTTGGGCTATTAGTGGCGGGGGTGGAGCTAGCTTTGGAGTG
ATAACGGCCTACAAAATCAAGCTGGTAAAAGTTCCTGACATTGTTACTGTTTTCCGAGTA
GTGAGGACCCTTAAACAAAATGCAATTGACATCGTTTACAGGTGGCAATTCATTGCAGAT
AATATAGATAACAATCTCTTTATAAGATTAACTGTAAAACCTACTAATGACAAGCAAAAA
GGAACTAAGACAATTGCAGCAACATTTGTAGCATTATTTCTAGGAGATTCCAGAAAACTT
CTATCGGTCATGGATAGGGATTTTCCACAATTGGGCTTACATATTGGGGATTGCAAGGAG
ATGAGTTGGATAGAATCTGAGCTTTTCTGGTCAAGTTTCCCTAATGGAACACCACCTGAT
GCTTTGCTCAACCGAATGCCTGGAGCAAAGTTTCTGAAGCGGAAGTCAGACTATTTGCAG
AAACCCATTCCCAAGGATAAACTGAAATCTATATTCGATAAAATGATTGAATTAGGAGAC
ACAGAGTTAGTATTCAATCCATACGGTGGAAGGATGAATGAGATCCCAGAATGGGAAACT
CCATTTCCCCACAGAGCAGGAAATATATTTAAAATCCAGTATGCAGCAAATTGGGAGGAA
GAAGGAAAGGAAGCAGAGAACTTCCATTTGAACCAGACCAGAGTATTGTACAACTACATG
ACTCCTTTTGTCTCAAAATCCCCGAGATGCGCATTTTTAAATTATAGAGACCTTGACATA
GGGGTCAATCATAATGGAAATCACCGCTACATAGAAGGCCGTGTTTATGGACTCAAGTAT
TTCAAGGGTAATTTTAATAAACTGGTCAAAGTCAAGACTTTGGTCGATCATGATAACTTC
TTCTGGAATGAACAAAGCACCCCACCTTTAGCAGCGTAG

Peptide Sequence

PEP ID

XP_016448797.1
PEP Infomation

PREDICTED: reticuline oxidase-like protein [Nicotiana tabacum]
Sequence

METSLYLTFFAFLSLLFAIYYIPLAASDPSYQSFLQCLSKHSDPSDHILSRVYTPNNSSY
KSVLQHYIRNKRFNRSTTLKPDIIFTPLQESHIQVAVICSKKTDKHLKIRSGGHDYEGIS
YVSNISFVLLDMSNLRSVDVDIHNETAWVQAGATLGELYYRIWEKSKIHAFPAGICPTVG
VGGHITGGGYGNLLRKYGLSVDNLIDAHIVDVHGQILNRESMGEDLFWAISGGGGASFGV
ITAYKIKLVKVPDIVTVFRVVRTLKQNAIDIVYRWQFIADNIDNNLFIRLTVKPTNDKQK
GTKTIAATFVALFLGDSRKLLSVMDRDFPQLGLHIGDCKEMSWIESELFWSSFPNGTPPD
ALLNRMPGAKFLKRKSDYLQKPIPKDKLKSIFDKMIELGDTELVFNPYGGRMNEIPEWET
PFPHRAGNIFKIQYAANWEEEGKEAENFHLNQTRVLYNYMTPFVSKSPRCAFLNYRDLDI
GVNHNGNHRYIEGRVYGLKYFKGNFNKLVKVKTLVDHDNFFWNEQSTPPLAA

Transcript Sequence

Gene sequence data has not been registered.